Coordinating distribution of water resources of a river across more than one administrative regions is a critic issue connected with rational resource development and environment conservation among different administrative bodies and finally with the resolving problems about water resources distribution among them . By the quantitative analysis and based on META-game theory, this paper has analyzed the conflicts over water distribution among several administrative bodies within the Heihe river basin, and established mathematic models to obtain reasonable recommendation that might benefit and be acceptable to each part in the conflicts in order to end the long time dispute over water distribution in these regions.