We research fractal characteristics of ECG signal, and find that it is logarithmic linear relationship between the boxes number covering signal and box scale. It is shown that ECG signal have some characteristics. Further more, we discover that fractal dimensions at QRS site are higher than others when using a time windows to detect signal. Based on this foundation, we raise a location algorithm of QRS waves which is based on fractal boxes dimension detection methods. The application results of this algorithm show that it can get rid of noise in ECG effectively with high speed, so this algorithm can be used in real time detection of ECG signal.