The administration system in universities plays an important role in the modification of the modern institute system. We discussed the micro level of reformation, namely the reformation on the system of universities. By considering current affairs, we mainly studied the inner administration of universities and the reformation of human resources, especially the building of the management team. By using the theory of management, combining with the development program about the education and talent, especially the newest requirement about the high education, we did a case study on Chongqing University and the University of Maryland and compared the administration system in universities of China and the Unite States. We also paid attention to the inner management and the building of the management team.