The fundamental purpose of student-centered engineering education certification is to promote or enhance "educational output". In order to meet the needs of water conservancy science and technology talent training under the background of the new era, Tongji University's port, waterway and coastal engineering major starts from the revision of the training plan, and implements the OBE concept through the revision of training objectives, the specific decomposition of graduation requirements, and the continuous improvement of curriculum system to realize the transition from cultivating "discipline-oriented" talents to cultivating "engineering-oriented" talents, from cultivating talents with strong professional and technical capabilities to cultivating compound talents with professional capabilities, professional qualities, and social responsibilities, to realize the substantial equivalence to international certification of hydraulic engineers. An evaluation mechanism for the achievement of courses and graduation requirements, and an evaluation mechanism for the rationality of training objectives have been established respectively, and example analysis combined with the operation of the mechanism is carried out, to achieve a comprehensive mid-to-long-term follow-up evaluation and continuous improvement of the training quality of undergraduates in this major.