Agricultural building and structure engineering is a specialty direction of facility agriculture. The reform of postgraduate training mode was analyzed. Based on the training requirements of professional master degree, the reform on combining course and teaching material system, professional teaching pattern, practical teaching, and cultivation of creative spirit was carried out. Curriculum system and teaching material system were perfected, double tutors and innovation teams were used for cultivating compound talents, and taking the way and contents of practice base as the basis of practice ability training platform.