Capstone course is an important required course to the certification requirements of international engineering education, which attracts extensive attention in international engineering education. This paper took civil engineering specialty of Wuyi University as an example, and introduced the complete capstone course system during four-year college education. Graduation project was reformed to capstone course according to the certification requirements of international engineering education. Innovative education and practice of capstone course includes teaching mode, performance evaluation method and inspection of teaching effect, which provides references for fostering internationalized application-oriented professionals in civil engineering specialty.