With the continuous development of information technology, building information model has become an important design and organization direction of architectural engineering courses. The contradiction between the traditional engineering course teaching system and the demand for new engineering talents in the new era calls for an urgent adjustment and improvement in the course design and organization, so as to adapt to and meet the demand of social development for the training of engineering management professionals. Based on the analysis of the current situation of the development of engineering management courses, taking the School of Architectural Engineering of Zhanjiang University of Science and Technology as an example, this paper discusses the course design and organization of engineering cost management of engineering management in applied undergraduate colleges based on BIM, in order to provide reference for the course design and organization of engineering management.