At present, with the rapid development of smart architecture in China, the demand for intelligent control talents has exploded. The lack of professional talents in construction environment who are proficient in intelligent control has become an important reason hindering the development of smart architecture. In view of the existing problems in the curriculum training system of the major of building environment and energy application engineering, guided by social needs and aiming at cultivating comprehensive talents with thick foundation, broad specialty and strong practical ability, this paper explores the intelligent control teaching system of the major of building environment under the emerging engineering education background based on the deep cooperation between the university and the enterprise. This paper puts forward three talent cultivation modes, namely school-enterprise joint laboratory, school-enterprise joint teaching and off-campus skill training, and makes in-depth research on teaching content, practice content and teaching form. Through in-depth university-enterprise cooperation, the organic combination and optimal allocation of university-enterprise resources are realized, breaking the traditional “deep bucket” course system of deepening disciplines, and jointly cultivating compound innovative talents of emerging engineering education under the guidance of wisdom and science and technology.